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原著論文

Yoshinaga, N., Miyamoto, T., Odahara, M., Takeda‐Kamiya, N., Toyooka, K., Nara, S., Nishimura, H., Ling, F., Su’etsugu, M., Yoshida, M. and Numata, K.
Design of an Artificial Peptide Inspired by Transmembrane Mitochondrial Protein for Escorting Exogenous DNA into the Mitochondria to Restore their Functions by Simultaneous Multiple Gene Expression. Advanced Functional Materials, 2306070 (2023) DOI:10.1002/adfm.202306070


Fujita, H., Osaku, A., Sakane, Y., Yoshida, K., Yamada, K., Nara, S. Mukai, T.* and Su'etsugu, M.* Enzymatic Supercoiling of Bacterial Chromosomes Facilitates Genome Manipulation. ACS Synth. Biol. 11, 3088–3099 (2022) DOI:10.1021/acssynbio.2c00353

Nara, S. and Su'etsugu, M. In vitro amplification of whole large plasmids via transposon-mediated oriC insertion. BioTechniques, 71, NO.4 (2021) DOI:10.2144/btn-2021-0068, Peek Behind the Paper selected

Ueno, H., Sawada, H., Soga, N., Sano,M., Nara, S., Tabata, K. V., Su’etsugu, M. and Noji, H. Amplification of over 100 kbp DNA from Single Template Molecules in Femtoliter Droplets. ACS Synth. Biol., 10, 2179-2186 (2021) DOI:10.1021/acssynbio.0c00584

Yoneji, T., Fujita, H., Mukai, T.*, and Su'etsugu, M.* Grand scale genome manipulation via chromosome swapping in Escherichia coli programmed by three one megabase chromosomes. Nucleic Acids Res., 49, 8407-8418 (2021) DOI:10.1093/nar/gkab298, NAR Breakthrough Article selected

Mukai, T.*, Yoneji, T., Yamada, K., Fujita, H., Nara, S. and Su'etsugu, M.* Overcoming the Challenges of Megabase-Sized Plasmid Construction in Escherichia coli . ACS Synth. Biol., 9, 1315-1327 (2020)

Islam, M.M., Odahara, M., Yoshizumi, T., Oikawa, K., Kimura, M., Su'etsugu, M. and Numata, K. Cell-Penetrating Peptide-Mediated Transformation of Large Plasmid DNA into Escherichia coli. ACS Synth. Biol., 8, 1215-1218 (2019)

Hasebe, T., Narita, K., Hidaka, S. and Su'etsugu, M. Efficient Arrangement of the Replication Fork Trap for In Vitro Propagation of Monomeric Circular DNA in the Chromosome-Replication Cycle Reaction. Life, 8, 43 (2018)

Takemoto, N.*, Numata, I., Su'etsugu, M.* and Miyoshi-Akiyama, T. Bacterial EndoMS/NucS acts as a clamp-mediated mismatch endonuclease to prevent asymmetric accumulation of replication errors. Nucleic Acids Res., 46, 6152-6165 (2018) (*co-corresponding)

Takada, H., Shiwa, Y., Takino, Y., Osaka, N., Ueda, S., Watanabe, S., Chibazakura, T., Su'etsugu, M., Utsumi, R. and Yoshikawa, H. Essentiality of WalRK for growth in Bacillus subtilis and its role during heat stress. Microbiology, 164, 670-684 (2018)

Su'etsugu, M., Takada, H., Katayama, T. and Tsujimoto, H. Exponential propagation of large circular DNA by reconstitution of a chromosome-replication cycle. Nucleic Acids Res., 45, 11525-11534 (2017) Access the recommendation on F1000Prime

Kamada, K., Su'etsugu, M., Takada, H., Miyata, M. and Hirano, T. Overall shapes of the SMC-ScpAB complex are determined by balance between constraint and relaxation of its structural parts. Structure, 25, 603-616 (2017)

Su'etsugu, M., Harada, Y., Keyamura, K., Matsunaga, C., Kasho, K., Abe, Y., Ueda, T. and Katayama, T. DnaA N-terminal domain interacts with Hda to facilitate replicase clamp-mediated inactivation of DnaA. Environ. Microbiol., 15, 3183-3195 (2013)

Su'etsugu, M. and Errington, J. The replicase sliding clamp dynamically accumulates behind progressing replication forks in Bacillus subtilis cells. Mol. Cell, 41, 720-732 (2011)

Su'etsugu, M., Nakamura, K., Keyamura, K., Kudo, Y., and Katayama, T. Hda monomerization by ADP binding promotes replicase clamp-mediated DnaA-ATP hydrolysis. J. Biol. Chem., 283, 36118-36131 (2008)

Fujimitsu, K., Su'etsugu, M., Yamaguchi, Y., Mazda, K., Fu, N., Kawakami, H., and Katayama, T. Modes of over-initiation, dnaA gene expression and the inhibition of cell division in a novel cold-sensitive hda mutant in Escherichia coli. J. Bacteriol., 190, 5368-53681 (2008)

Keyamura, K., Fukikawa, N., Ishida, T., Ozaki, S., Su'etsugu, M., Fujimitsu, K., Kagawa, W., Yokoyama, S., Kurumizaka, H. and Katayama, T. The interaction of DiaA and DnaA regulates the replication cycle in E. coli by directly promoting ATP-DnaA-specific initiation complexes. Genes Dev., 21, 2083-2099 (2007)

Kawakami, H., Ozaki, S., Suzuki, S., Nakamura, K., Senriuchi, T., Su'etsugu, M., Fujimitsu, K. and Katayama, T. The exceptionally tight affinity of DnaA for ATP/ADP requires a unique aspartic acid residue in the AAA+ sensor 1 motif. Mol. Microbiol., 62, 1310-1324 (2006)

Kawakami, H., Su'etsugu, M. and Katayama, T. An isolated Hda–clamp complex is functional in the regulatory inactivation of DnaA and DNA replication. J. Struct. Biol. 156, 220-229 (2006)

Ote, T., Hashimoto M., Ikeuchi, Y., Su'etsugu, M., Suzuki, T., Katayama, T. and Kato, J.  Involvement of the Escherichia coli folate-binding protein YgfZ in RNA modification and regulation of chromosomal replication initiation. Mol. Microbiol. 59, 265-274 (2006)

Su'etsugu, M., Shimuta, T., Ishida, T., Kawakami, H. and Katayama, T. Protein Associations in DnaA-ATP Hydrolysis Mediated by the Replicase Clamp-Hda Complex. J. Biol. Chem. 280, 6528-6536 (2005)

Su'etsugu, M., Takata, M., Kubota, T., Matsuda, Y. and Katayama, T. Molecular mechanism of DNA replication-coupled inactivation of the initiator protein in Escherichia coli: Interaction of DnaA with the sliding clamp-loaded DNA and the sliding clamp-Hda complex. Genes Cells 9, 509-522 (2004)

Su'etsugu, M., Emoto, A., Fujimitsu, K., Keyamura, K. and Katayama, T. Transcriptional control for initiation of chromosomal replication in Escherichia coli: fluctuation of the level of origin transcription ensures timely initiation. Genes Cells 8, 731-745 (2003)

Obita, T., Iwura, T., Su'etsugu, M., Yoshida, Y., Tanaka, Y., Katayama, T., Ueda, T. and Imoto, T. Determination of the secondary structure in solution of the Escherichia coli DnaA DNA-binding domain. Biochem. Biophys. Res. Commun. 299, 42-48 (2002)

Su'etsugu, M., Kawakami, H., Kurokawa, K., Kubota, T., Takata, M. and Katayama, T. DNA replication-coupled inactivation of DnaA protein in vitro: a role for DnaA arginine-334 of the AAA+ Box VIII motif in ATP hydrolysis. Mol. Microbiol. 40, 376-386 (2001)

国内総説、解説

末次 正幸、なぜ今,長鎖DNA合成なのか、実験医学、羊土社、Vol.41, 3,(2023)

末次 正幸、長鎖DNA合成技術と合成細胞―人工デザインされたゲノムの合成と評価にむけて、実験医学増刊 セントラルドグマの新常識、羊土社、Vol.40, 12,(2022)

末次 正幸、大腸菌染色体複製サイクルの試験管内再構成と合成生物学、生物物理誌、日本生物物理学会、Vol.60, 5,(2020)

奈良 聖亜、末次 正幸、大腸菌いらずのセルフリー長鎖DNAクローニング、実験医学 2020年4月号(クローズアップ実験法)、羊土社、Vol.38, 6,(2019)

末次 正幸、染色体複製サイクルの自律的な繰り返しによるDNA増幅反応、化学と生物(プロダクトイノベーション)、日本農芸化学会、Vol.57, 1, pp.64-69 (2019)

末次 正幸、細胞を使わない長鎖DNA 合成技術、「月刊バイオインダストリー」 2018年8月号、シーエムシー出版、(2018)

末次 正幸,DNA 複製装置スライディングクランプの枯草菌の細胞内における動的な集合、新着論文レビュー(FIRST AUTHOR'S)Web,2011.4.11

著書

末次 正幸、ゲノム複製サイクル再構成系とその展望、 「人工細胞の創製とその応用」(植田充美 監修)、シーエムシー出版、172-180頁(2017)

Katayama, T. and Su'etsugu, M. Chromosome replication in E.coli and B.subtilis. Escherichia coli and Bacillus subtilis; the frontiers of molecular microbiology revisited (Sadaie, Y. & Matsumoto, K., eds), chapter 3-1, Research Signpost, 29-43 (2012)

片山 勉、末次 正幸川上 広宣、 大腸菌ゲノムDNA複製系、 「ゲノミクス・プロテオミクスの新展開-生物情報の解析と応用-」(今中忠行監修)、エヌ・ティー・エス、 57-64頁(2004)

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CrimsonNinjas(iGEM高校生チーム) 、週刊iGEM第三号『日本の合成生物学者紹介①~末次正幸教授~』(2023.3)

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NewsPicks interview、僕は「生命をつくる」ためにこの技術を開発した(2023.1)

illumina customer interview、PCR法を超える、セルフリーの長鎖DNA増幅技術を開発(2019)

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